Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EMI40456.1 | EMI40630.1 | RRSWK_06865 | RRSWK_07039 | Non-ribosomal peptide synthetase. | Hypothetical protein. | 0.418 |
EMI40628.1 | EMI40629.1 | RRSWK_07037 | RRSWK_07038 | Serine/threonine protein kinase related protein. | Intracellular protease, PfpI family. | 0.459 |
EMI40628.1 | EMI40630.1 | RRSWK_07037 | RRSWK_07039 | Serine/threonine protein kinase related protein. | Hypothetical protein. | 0.413 |
EMI40629.1 | EMI40628.1 | RRSWK_07038 | RRSWK_07037 | Intracellular protease, PfpI family. | Serine/threonine protein kinase related protein. | 0.459 |
EMI40629.1 | EMI40630.1 | RRSWK_07038 | RRSWK_07039 | Intracellular protease, PfpI family. | Hypothetical protein. | 0.693 |
EMI40630.1 | EMI40456.1 | RRSWK_07039 | RRSWK_06865 | Hypothetical protein. | Non-ribosomal peptide synthetase. | 0.418 |
EMI40630.1 | EMI40628.1 | RRSWK_07039 | RRSWK_07037 | Hypothetical protein. | Serine/threonine protein kinase related protein. | 0.413 |
EMI40630.1 | EMI40629.1 | RRSWK_07039 | RRSWK_07038 | Hypothetical protein. | Intracellular protease, PfpI family. | 0.693 |
EMI40630.1 | EMI46006.1 | RRSWK_07039 | RRSWK_01474 | Hypothetical protein. | Magnesium protoporphyrin chelatase. | 0.471 |
EMI46006.1 | EMI40630.1 | RRSWK_01474 | RRSWK_07039 | Magnesium protoporphyrin chelatase. | Hypothetical protein. | 0.471 |