STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_0189PFAM: sodium:dicarboxylate symporter; KEGG: asa:ASA_1706 sodium:dicarboxylate symporter family protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (430 aa)    
Predicted Functional Partners:
Tola_3005
Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
   
  
 0.509
Tola_1369
PFAM: carbon starvation protein CstA; KEGG: aha:AHA_3292 carbon starvation protein A.
 
  
 0.501
Tola_2230
KEGG: aha:AHA_1922 type II citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family.
  
  
 0.487
Tola_0487
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: dar:Daro_0217 glutamate synthase (NADH) large subunit.
     
 0.477
Tola_1863
KEGG: aci:ACIAD3488 amino acid ABC transporter ATP-binding protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC transporter related; binding-protein-dependent transport systems inner membrane component; SMART: AAA ATPase.
  
  
 0.461
Tola_1998
KEGG: glo:Glov_1989 multi-sensor hybrid histidine kinase; TIGRFAM: diguanylate cyclase; hemerythrin-like metal-binding protein; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; Hemerythrin HHE cation binding domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein.
     
 0.446
Tola_0080
TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: asa:ASA_3987 glutathione-regulated potassium efflux system protein KefC; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.441
Tola_2757
PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: aha:AHA_0416 major facilitator transporter.
 
  
 0.435
Tola_2471
PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: pla:Plav_3451 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
  
  
 0.417
Tola_2329
Putative PAS/PAC sensor protein; KEGG: kpe:KPK_1699 nitrogen fixation negative regulator NifL; TIGRFAM: nitrogen fixation negative regulator NifL; PAS sensor protein; PFAM: PAS fold domain protein; SMART: PAC repeat-containing protein; PAS domain containing protein.
     
 0.412
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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