STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_0370TIGRFAM: general secretion pathway protein C; KEGG: aha:AHA_0568 general secretion pathway protein C. (282 aa)    
Predicted Functional Partners:
Tola_0367
TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: aha:AHA_0569 general secretion pathway protein D.
 
 
 0.990
Tola_0362
TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: asa:ASA_3780 general secretion pathway protein I.
 
  
 0.907
Tola_0361
TIGRFAM: general secretion pathway protein J; KEGG: asa:ASA_3781 general secretion pathway protein J.
 
  
 0.897
Tola_0359
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
   
 0.892
Tola_0360
PFAM: General secretion pathway protein K; KEGG: aha:AHA_0576 general secretion pathway protein K.
 
  
 0.887
Tola_0358
General secretion pathway M protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
   
 0.878
Tola_0363
TIGRFAM: general secretion pathway protein H; KEGG: ecf:ECH74115_B0007 general secretion pathway protein H.
 
  
 0.875
Tola_0357
PFAM: type II secretion system protein N; KEGG: aha:AHA_0579 type II secretion system protein N.
 
   
 0.865
Tola_0364
TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: asa:ASA_3778 general secretion pathway protein G.
 
  
 0.855
Tola_1552
PFAM: Rhomboid family protein; KEGG: asa:ASA_1773 hypothetical protein.
  
     0.724
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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