STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_0389PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mag:amb0182 ABC-type multidrug transport system. (308 aa)    
Predicted Functional Partners:
Tola_0388
PFAM: ABC-2 type transporter; KEGG: rce:RC1_2058 ABC transporter, permease protein, putative.
  
 0.989
Tola_0390
PFAM: secretion protein HlyD family protein; KEGG: pol:Bpro_3452 HlyD family secretion protein.
  
 0.959
Tola_0391
PFAM: Transcriptional regulator TetR; regulatory protein TetR; KEGG: dal:Dalk_2023 transcriptional regulator, TetR family.
 
  
 0.828
Tola_0387
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: asa:ASA_0523 outer membrane protein TolC.
     
 0.737
Tola_0592
PFAM: ABC-2 type transporter; KEGG: dar:Daro_0988 hypothetical protein.
  
 0.633
Tola_2467
PFAM: ABC-2 type transporter; KEGG: pla:Plav_3447 ABC-2 type transporter.
  
 0.598
Tola_0386
PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: ajs:Ajs_1367 potassium-tellurite ethidium and proflavin transporter.
       0.511
Tola_0392
ADP-ribose diphosphatase; PFAM: NUDIX hydrolase; KEGG: aha:AHA_3765 hypothetical protein.
       0.509
Tola_0393
PFAM: protein of unknown function DUF1249; KEGG: asa:ASA_0526 hypothetical protein.
       0.509
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
    
 
 0.459
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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