STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_0458KEGG: aha:AHA_0276 hypothetical protein. (180 aa)    
Predicted Functional Partners:
Tola_0357
PFAM: type II secretion system protein N; KEGG: aha:AHA_0579 type II secretion system protein N.
  
     0.718
Tola_0468
KEGG: saz:Sama_0799 hypothetical protein.
  
     0.680
Tola_0358
General secretion pathway M protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.671
Tola_2662
KEGG: aha:AHA_3786 general secretion pathway protein B.
  
     0.641
Tola_0370
TIGRFAM: general secretion pathway protein C; KEGG: aha:AHA_0568 general secretion pathway protein C.
  
     0.605
Tola_0359
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.599
Tola_0886
KEGG: aha:AHA_1757 type IV pilus biogenesis/stability protein PilW; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein.
  
     0.593
Tola_0363
TIGRFAM: general secretion pathway protein H; KEGG: ecf:ECH74115_B0007 general secretion pathway protein H.
 
     0.584
Tola_0457
Signal transduction histidine kinase, nitrogen specific, NtrB; KEGG: aha:AHA_0275 nitrogen regulation protein NR(II); TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein.
       0.584
Tola_1570
Hypothetical protein; KEGG: asa:ASA_2532 type IV pilus assembly protein TapV.
  
     0.582
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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