STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_0573PFAM: inner-membrane translocator; KEGG: vpa:VPA1085 ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (328 aa)    
Predicted Functional Partners:
rbsA-2
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.996
Tola_0574
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_04156 D-ribose transporter subunit RbsB.
 0.996
Tola_1943
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: msu:MS0201 RbsB protein.
 0.973
Tola_0052
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ecs:ECs5071 putative carbohydrate binding protein.
 0.970
rbsA
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.967
Tola_1942
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: msu:MS0200 MglA protein.
 0.967
rbsD-2
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.942
Tola_0053
PFAM: inner-membrane translocator; KEGG: kpe:KPK_5180 putative ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
 
0.911
Tola_1941
PFAM: inner-membrane translocator; KEGG: msu:MS0199 AraH protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.908
Tola_1974
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ecd:ECDH10B_4279 D-allose ABC transporter periplasmic-binding protein.
 
 0.876
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.