STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_0678PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: maq:Maqu_3532 TonB-dependent heme/hemoglobin receptor family protein. (641 aa)    
Predicted Functional Partners:
Tola_1802
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 
 0.965
Tola_0677
PFAM: periplasmic binding protein; KEGG: vsp:VS_II1071 ABC transporter, periplasmic susbtrate binding protein; enterobactin uptake.
 
  
 0.744
Tola_0675
PFAM: transport system permease protein; KEGG: vsp:VS_II1068 ABC transporter, transmembrane protein; enterobactin uptake; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.700
Tola_0676
PFAM: transport system permease protein; KEGG: vsp:VS_II1070 ABC transporter, transmembrane protein; enterobactin uptake; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.698
Tola_0674
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vsp:VS_II1067 ABC transporter, ATP-binding protein; enterobactin uptake.
 
    0.694
Tola_1485
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csa:Csal_1051 ABC transporter related.
 
  
 0.692
Tola_1267
PFAM: Hemolysin-type calcium-binding region; KEGG: shm:Shewmr7_3642 putative outer membrane adhesin like protein.
  
 
 
 0.682
Tola_1264
PFAM: Hemolysin-type calcium-binding region; KEGG: cja:CJA_1396 putative hemolysin.
    
 
 0.641
Tola_1406
PFAM: Alginate lyase 2; KEGG: pmy:Pmen_3057 hypothetical protein.
    
 
 0.641
Tola_1413
PFAM: Alginate lyase; KEGG: pau:PA14_18470 poly(beta-D-mannuronate) lyase.
    
 
 0.641
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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