STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_0743KEGG: hin:HI1504 I protein. (382 aa)    
Predicted Functional Partners:
Tola_0744
KEGG: ecy:ECSE_2584 putative phage major head subunit.
 
  
 0.962
Tola_0746
PFAM: protein of unknown function DUF1320; KEGG: tgr:Tgr7_1635 hypothetical protein.
 
   
 0.928
Tola_0748
KEGG: son:SO_0679 hypothetical protein.
 
     0.918
Tola_0739
PFAM: protein of unknown function DUF935; KEGG: hdu:HD0124 Mu-like phage GP29.
 
    0.890
Tola_0740
KEGG: tgr:Tgr7_1640 F protein (gpF) (protein GP30).
 
    0.886
Tola_0742
TIGRFAM: phage virion morphogenesis protein; KEGG: hdu:HD1558 bacteriophage Mu G-like protein.
 
    0.884
Tola_0737
KEGG: ecy:ECSE_2592 hypothetical protein.
 
     0.881
Tola_0738
KEGG: son:SO_2679 prophage MuSo2, portal protein, putative.
 
     0.881
Tola_0749
TIGRFAM: phage tape measure protein; KEGG: sbm:Shew185_2103 phage tape measure protein.
 
    0.876
Tola_0736
KEGG: ecs:ECs4967 hypothetical protein.
 
     0.857
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.