STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_0751KEGG: rso:RSc0875 putative transmembrane protein. (499 aa)    
Predicted Functional Partners:
Tola_0752
KEGG: rso:RSc0875 putative transmembrane protein.
     0.993
Tola_0757
KEGG: asa:ASA_1680 hypothetical protein.
 
    0.932
Tola_0748
KEGG: son:SO_0679 hypothetical protein.
 
     0.844
Tola_0750
KEGG: rso:RSc0874 hypothetical protein.
       0.787
Tola_0749
TIGRFAM: phage tape measure protein; KEGG: sbm:Shew185_2103 phage tape measure protein.
 
    0.753
Tola_0753
Hypothetical protein.
       0.726
Tola_0754
KEGG: mca:MCA2673 hypothetical protein.
       0.706
Tola_0755
KEGG: mca:MCA2674 hypothetical protein.
       0.706
Tola_0756
KEGG: rso:RSc0878 hypothetical protein.
       0.706
Tola_0758
KEGG: asa:ASA_1681 hypothetical protein.
       0.697
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.