STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_0835PFAM: import inner membrane translocase subunit Tim44; KEGG: asa:ASA_3289 import inner membrane translocase. (286 aa)    
Predicted Functional Partners:
Tola_0938
Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
  
    0.608
Tola_1093
Putative sensor with HAMP domain; PFAM: histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: asa:ASA_2879 methyl-accepting chemotaxis protein.
  
     0.608
Tola_1262
KEGG: asa:ASA_1672 periplasmic protein.
  
     0.542
Tola_2708
TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: aha:AHA_3644 cyd operon protein YbgT.
  
     0.480
Tola_0261
PFAM: protein of unknown function DUF615; KEGG: aha:AHA_3937 hypothetical protein; Belongs to the UPF0307 family.
  
     0.455
Tola_0836
TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: yen:YE1643 glucose-specific PTS system IIBC components.
       0.454
Tola_1523
PFAM: integrase family protein; KEGG: aha:AHA_2278 phage integrase family site specific recombinase.
  
     0.449
Tola_1261
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: aha:AHA_2699 agglutination protein.
  
     0.446
Tola_1266
KEGG: shm:Shewmr7_3642 putative outer membrane adhesin like protein.
  
     0.439
Tola_0757
KEGG: asa:ASA_1680 hypothetical protein.
  
     0.417
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.