STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_0872Lysophospholipase; PFAM: lipolytic protein G-D-S-L family; KEGG: asa:ASA_0828 acyl-CoA thioesterase I. (199 aa)    
Predicted Functional Partners:
Tola_0874
PFAM: protein of unknown function DUF214; KEGG: aha:AHA_3487 ABC-type transport system, permease component.
 
     0.910
Tola_0873
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aha:AHA_3488 ABC transporter, ATP-binding protein.
 
     0.735
Tola_0222
PFAM: protein of unknown function DUF1593; KEGG: sde:Sde_0565 signal peptide and transmembrane prediction.
 
 
 0.615
Tola_0871
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: mfa:Mfla_0716 two component transcriptional regulator.
     
 0.505
Tola_0870
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: mfa:Mfla_0715 periplasmic sensor signal transduction histidine kinase.
       0.504
Tola_3171
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; SMART: phospholipid/glycerol acyltransferase; KEGG: sde:Sde_3531 2-acyl-glycerophospho-ethanolamine acyltransferase.
  
  
 0.459
Tola_1266
KEGG: shm:Shewmr7_3642 putative outer membrane adhesin like protein.
  
   0.423
Tola_2621
PFAM: Ig domain protein group 1 domain protein; KEGG: swp:swp_0520 Ig-like, group 1.
  
   0.423
Tola_0162
PFAM: protein of unknown function DUF323; Methyltransferase type 11; Methyltransferase type 12; KEGG: aha:AHA_0211 generic methyltransferase.
  
  
 0.409
cysG
uroporphyrin-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
     
 0.409
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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