STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1003KEGG: sat:SYN_00344 putative cytoplasmic protein. (127 aa)    
Predicted Functional Partners:
Tola_1002
PFAM: permease; KEGG: tmz:Tmz1t_1855 permease.
  
  
 0.778
Tola_1001
PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: pin:Ping_1883 phosphoesterase, PA-phosphatase related.
       0.714
Tola_1005
PFAM: permease; KEGG: pna:Pnap_2844 permease.
  
  
 0.622
Tola_1004
TIGRFAM: redox-active disulfide protein 2; KEGG: psa:PST_0232 thiol-disulfide isomerase and thioredoxins family protein.
  
    0.617
Tola_1000
PFAM: diacylglycerol kinase; KEGG: bcy:Bcer98_3028 diacylglycerol kinase.
       0.592
Tola_1825
PFAM: beta-lactamase domain protein; Rubredoxin-type Fe(Cys)4 protein; flavodoxin/nitric oxide synthase; KEGG: eba:ebA539 anaerobic nitric oxide reductase flavorubredoxin.
   
  
 0.434
msrB
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.400
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.