STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1149KEGG: asa:ASA_0611 hypothetical protein. (357 aa)    
Predicted Functional Partners:
Tola_1147
KEGG: sbn:Sbal195_0447 hypothetical protein.
 
  
 0.947
Tola_1148
PFAM: glycosyl transferase family 2; KEGG: asa:ASA_0610 glycosyl transferase family protein.
 
  
 0.936
Tola_0643
KEGG: sbn:Sbal195_0447 hypothetical protein.
 
  
 0.778
Tola_0644
PFAM: glycosyl transferase family 2; KEGG: shm:Shewmr7_0420 glycosyl transferase, family 2.
 
  
 0.724
macB
ABC transporter related; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.709
Tola_0762
KEGG: aha:AHA_2596 hypothetical protein.
  
     0.617
Tola_1150
KEGG: cvi:CV_0096 hypothetical protein.
       0.615
Tola_0782
KEGG: aha:AHA_1915 hypothetical protein.
  
    0.614
Tola_1259
Type I secretion system ATPase; KEGG: asa:ASA_1669 toxin secretion ATP-binding protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
  
 
 0.607
Tola_1261
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: aha:AHA_2699 agglutination protein.
 
 
 0.556
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.