STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1220Site-specific DNA-methyltransferase (adenine-specific); PFAM: N-6 DNA methylase; KEGG: shn:Shewana3_4240 N-6 DNA methylase. (567 aa)    
Predicted Functional Partners:
Tola_1221
PFAM: restriction modification system DNA specificity domain; KEGG: neu:NE0384 restriction modification system, type I.
 
 
 0.983
Tola_1223
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.978
Tola_1182
PFAM: restriction modification system DNA specificity domain; KEGG: kpe:KPK_4975 type I restriction modification DNA specificity domain protein.
 
 
 0.899
Tola_1157
PFAM: restriction modification system DNA specificity domain; KEGG: hsm:HSM_0486 restriction modification system DNA specificity subunit.
 
 
 0.897
Tola_1185
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.896
Tola_1222
PFAM: protein of unknown function DUF511; KEGG: prw:PsycPRwf_0030 hypothetical protein.
  
   0.861
Tola_2270
PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicase; KEGG: shm:Shewmr7_1787 type III restriction enzyme, res subunit.
 
 
 0.775
Tola_2272
PFAM: restriction modification system DNA specificity domain; KEGG: shw:Sputw3181_1088 putative type I site-specific restriction-modification system, S subunit.
 
 
 0.755
Tola_1155
PFAM: type III restriction protein res subunit; protein of unknown function DUF450; helicase domain protein; SMART: DEAD-like helicase; KEGG: abo:ABO_1832 type I restriction-modification system, R subunit.
 
 
 0.682
Tola_3113
PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: maq:Maqu_1910 type III restriction enzyme, res subunit.
 
 
 0.509
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.