STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1259Type I secretion system ATPase; KEGG: asa:ASA_1669 toxin secretion ATP-binding protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (714 aa)    
Predicted Functional Partners:
Tola_1260
TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: asa:ASA_1670 HlyD family secretion protein.
 
 0.994
Tola_1261
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: aha:AHA_2699 agglutination protein.
 
  
 0.961
Tola_1262
KEGG: asa:ASA_1672 periplasmic protein.
 
  
 0.945
Tola_1263
Diguanylate cyclase/phosphodiesterase with extracellular sensor; KEGG: asa:ASA_1673 GGDEF/EAL protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein.
 
  
 0.901
Tola_1267
PFAM: Hemolysin-type calcium-binding region; KEGG: shm:Shewmr7_3642 putative outer membrane adhesin like protein.
 
  
 0.878
Tola_1264
PFAM: Hemolysin-type calcium-binding region; KEGG: cja:CJA_1396 putative hemolysin.
 
  
 0.834
Tola_0387
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: asa:ASA_0523 outer membrane protein TolC.
  
  
 0.696
Tola_1279
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: aha:AHA_2425 drug efflux ABC transporter ATP-binding and permease subunits.
   
 
0.672
Tola_1280
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: aha:AHA_2427 ABC transporter, ATP-binding protein.
   
 
0.672
msbA
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
   
 
0.672
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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