STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1298PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: psb:Psyr_0050 lysine exporter protein LysE/YggA. (209 aa)    
Predicted Functional Partners:
Tola_1296
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: asa:ASA_0806 amino acid efflux LysE family protein.
 
    
0.584
Tola_1299
PFAM: GCN5-related N-acetyltransferase; KEGG: pin:Ping_0252 GCN5-related N-acetyltransferase.
  
    0.516
Tola_1297
KEGG: reh:H16_A1348 hypothetical membrane associated protein.
       0.441
Tola_1300
PFAM: pseudouridine synthase; KEGG: psb:Psyr_2133 pseudouridine synthase.
  
    0.434
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.