STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1326KEGG: ade:Adeh_3220 hypothetical protein. (341 aa)    
Predicted Functional Partners:
Tola_1507
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: msl:Msil_2751 respiratory-chain NADH dehydrogenase domain 51 kDa subunit.
   
   0.974
nuoC
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
    
   0.952
Tola_1768
KEGG: swi:Swit_3329 hypothetical protein.
 
 
 0.888
Tola_2645
NADH-quinone oxidoreductase, chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
   
 
 0.872
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.869
Tola_1323
KEGG: gur:Gura_4371 hypothetical protein.
 
  
 0.748
Tola_1327
PFAM: Carboxylesterase type B; KEGG: asu:Asuc_2093 carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family.
 
  
 0.727
Tola_1331
PFAM: Carboxymuconolactone decarboxylase; Cupin 2 conserved barrel domain protein; Cupin domain protein; KEGG: sus:Acid_2912 carboxymuconolactone decarboxylase.
 
  
 0.715
Tola_1330
PFAM: peptidase S15; KEGG: gur:Gura_4372 alpha/beta fold family hydrolase-like protein.
 
 
 
 0.673
Tola_3171
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; SMART: phospholipid/glycerol acyltransferase; KEGG: sde:Sde_3531 2-acyl-glycerophospho-ethanolamine acyltransferase.
  
 
 0.654
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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