STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1339PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mfa:Mfla_2611 alpha amylase, catalytic region. (643 aa)    
Predicted Functional Partners:
Tola_1232
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: pin:Ping_2381 alpha-D-1,4-glucosidase.
  
  
 
0.924
Tola_0814
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.920
Tola_2886
Glucan 1,3-alpha-glucosidase; PFAM: glycoside hydrolase family 31; KEGG: eca:ECA1968 putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.914
Tola_1338
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pin:Ping_2011 ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  
 0.768
Tola_1336
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_pAT_377 ABC transporter sugar permease.
  
  
 0.641
Tola_1337
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_0230 binding-protein-dependent transport systems inner membrane component.
  
  
 0.581
Tola_2695
KEGG: asa:ASA_0762 glycogen debranching enzyme; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.528
Tola_1342
PFAM: amino acid permease-associated region; KEGG: pfo:Pfl01_4556 amino acid permease-associated region.
   
 0.527
Tola_1535
TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: rru:Rru_A1030 amino acid permease-associated region.
   
 0.527
Tola_2339
PFAM: amino acid permease-associated region; KEGG: asa:ASA_3136 inner membrane protein YjeH.
   
 0.527
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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