STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1391TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aha:AHA_2118 2-deoxyglucose-6-phosphatase. (216 aa)    
Predicted Functional Partners:
Tola_2350
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: eca:ECA3036 putative phosphatase.
  
  
0.929
Tola_0283
TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: aha:AHA_0551 PTS system mannitol-specific EIICBA component (EIICBA-mtl) (EII-mtl).
  
 
  0.906
mtlD
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: asa:ASA_3756 mannitol-1-phosphate 5-dehydrogenase.
    
  0.904
Tola_3084
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: ypi:YpsIP31758_1812 putative D-arabinitol 4-dehydrogenase.
    
  0.904
Tola_0071
TIGRFAM: beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cja:CJA_3014 hypothetical protein.
  
   
 0.767
Tola_1392
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: aha:AHA_2114 multidrug resistance protein MdtK.
  
   0.501
Tola_1393
PFAM: protein of unknown function UPF0253; KEGG: spe:Spro_3762 hypothetical protein.
       0.415
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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