STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1578PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ent:Ent638_2855 histidine/lysine/arginine/ornithine transporter subunit. (257 aa)    
Predicted Functional Partners:
Tola_1579
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE1320 histidine transport system permease protein HisM.
 
 0.991
Tola_1580
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3325 polar amino acid ABC transporter, inner membrane subunit.
 
 
 0.990
Tola_1581
KEGG: ent:Ent638_2859 cationic amino acid ABC transporter, periplasmic binding protein; TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.976
Tola_0901
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: asa:ASA_2674 ABC-type histidine/lysine/arginine/ornithine transporter, permease protein.
  
 0.867
Tola_0864
KEGG: aha:AHA_1873 peptide ABC transporter, ATP-binding protein SapD; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
     
0.859
Tola_0900
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: asa:ASA_2675 ABC-type histidine/lysine/arginine/ornithine transporter, permease component.
  
 0.849
Tola_1633
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_4293 histidine transport system permease protein.
 
  
 0.849
Tola_1634
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_4292 putative transport system permease ABC transporter protein.
  
 0.834
Tola_0171
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppf:Pput_0690 polar amino acid ABC transporter, inner membrane subunit.
    0.781
Tola_0899
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: asa:ASA_2676 ABC-type histidine/lysine/arginine/ornithine transporter, periplasmic binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
  
 0.776
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
Server load: medium (76%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.