STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1579TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE1320 histidine transport system permease protein HisM. (238 aa)    
Predicted Functional Partners:
Tola_1578
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ent:Ent638_2855 histidine/lysine/arginine/ornithine transporter subunit.
 
 0.991
Tola_1580
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3325 polar amino acid ABC transporter, inner membrane subunit.
 
 
0.988
Tola_1581
KEGG: ent:Ent638_2859 cationic amino acid ABC transporter, periplasmic binding protein; TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; Belongs to the bacterial solute-binding protein 3 family.
 
 0.979
Tola_0898
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aha:AHA_1684 histidine ABC transporter, ATP-binding protein.
  
 0.861
Tola_1631
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nocP1; ABC transporter nucleotide binding/ATPase protein.
  
 0.861
Tola_0899
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: asa:ASA_2676 ABC-type histidine/lysine/arginine/ornithine transporter, periplasmic binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
  
 0.796
Tola_1632
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ABC transporter substrate binding protein (amino acid); K10013 lysine/arginine/ornithine transport system substrate-binding protein.
 
  
 0.795
Tola_0172
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: pfo:Pfl01_2802 extracellular solute-binding protein.
 
  
 0.790
Tola_1862
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: bac:BamMC406_4454 extracellular solute-binding protein.
 
  
 0.770
Tola_1984
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pin:Ping_2429 ABC transporter for histidine/lysine/arginine/ornithine ATP-binding protein.
  
 0.753
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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