STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1607PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; KEGG: maq:Maqu_4137 IstB ATP binding domain-containing protein. (251 aa)    
Predicted Functional Partners:
Tola_1606
PFAM: Integrase catalytic region; KEGG: shn:Shewana3_1250 integrase catalytic subunit.
 
  
 0.951
Tola_2683
PFAM: Integrase catalytic region; KEGG: shn:Shewana3_1250 integrase catalytic subunit.
 
  
 0.813
Tola_1170
KEGG: ecd:ECDH10B_2791 CP4-57 prophage; hypothetical protein.
  
 
 0.493
Tola_2276
KEGG: ecd:ECDH10B_2791 CP4-57 prophage; hypothetical protein.
  
 
 0.493
Tola_2727
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.493
Tola_1605
Hypothetical protein.
       0.486
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.446
Tola_1604
Hypothetical protein.
       0.423
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.