STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1648PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pfl:PFL_0716 antibiotic biosynthesis monooxygenase domain-containing protein. (97 aa)    
Predicted Functional Partners:
Tola_1647
PFAM: 4-oxalocrotonate tautomerase; KEGG: pde:Pden_0208 4-oxalocrotonate tautomerase.
       0.695
Tola_1503
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: yen:YE0340 hypothetical protein.
  
     0.677
Tola_1646
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3131 LysR family transcriptional regulator.
       0.446
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.