STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1659PFAM: thioesterase superfamily protein; KEGG: sbn:Sbal195_1431 thioesterase superfamily protein. (147 aa)    
Predicted Functional Partners:
Tola_1658
PFAM: beta-lactamase domain protein; KEGG: dps:DP2748 hypothetical protein.
 
     0.819
Tola_1661
PFAM: protein of unknown function DUF134; KEGG: ppr:PBPRB1238 putative DNA-binding protein; Belongs to the UPF0251 family.
 
     0.658
Tola_1657
TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; KEGG: pna:Pnap_2039 ModD protein; Belongs to the NadC/ModD family.
       0.592
Tola_1660
KEGG: sfr:Sfri_1975 hypothetical protein.
       0.540
Tola_0308
PFAM: protein of unknown function DUF134; KEGG: ppr:PBPRB1238 putative DNA-binding protein; Belongs to the UPF0251 family.
 
     0.530
Tola_1204
PFAM: protein of unknown function DUF134; KEGG: ppr:PBPRB1238 putative DNA-binding protein; Belongs to the UPF0251 family.
 
     0.520
plsX
Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
 
  
 0.511
Tola_1656
Hypothetical protein.
       0.448
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.