STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pduWTIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: yen:YE2747 propionate kinase. (392 aa)    
Predicted Functional Partners:
Tola_0877
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
 
 
 0.998
Tola_1693
Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
   
 0.992
Tola_2471
PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: pla:Plav_3451 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
 
 0.985
Tola_1704
TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: yen:YE2748 putative uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
    0.778
Tola_1702
TIGRFAM: ethanolamine utilization protein, EutP; KEGG: yen:YE2746 hypothetical protein; Belongs to the EutP/PduV family.
  
  
 0.735
Tola_1701
PFAM: microcompartments protein; KEGG: yen:YE2745 putative propanediol utilization protein.
  
    0.718
Tola_1696
TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; protein of unknown function DUF336; KEGG: yen:YE2740 putative propanediol utilization protein: B12 related; Belongs to the Cob(I)alamin adenosyltransferase family.
     
 0.692
Tola_1699
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: yen:YE2743 putative NADH dehydrogenase.
  
  
 0.684
Tola_1700
PFAM: microcompartments protein; KEGG: yen:YE2744 putative propanediol utilization protein: polyhedral bodies.
  
    0.680
Tola_1698
PFAM: iron-containing alcohol dehydrogenase; KEGG: yen:YE2742 putative propanediol utilization protein: propanol dehydrogenase.
  
  
 0.676
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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