STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1747TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: psb:Psyr_1731 EmrB/QacA family drug resistance transporter. (505 aa)    
Predicted Functional Partners:
Tola_1746
PFAM: secretion protein HlyD family protein; KEGG: pae:PA5159 multidrug resistance protein.
 
 
 0.967
Tola_1032
PFAM: secretion protein HlyD family protein; KEGG: vch:VC1410 multidrug resistance protein VceA.
 
 
 0.876
Tola_1745
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pfo:Pfl01_3644 RND efflux system, outer membrane lipoprotein, NodT.
 
  
 0.818
Tola_1744
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: pfo:Pfl01_3645 MarR family transcriptional regulator.
 
  
 0.798
Tola_1031
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: vco:VC0395_A1020 putative multidrug resistance protein.
 
  
 0.494
Tola_0237
TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: ppr:PBPRA3006 multidrug resistance protein.
  
   
 0.421
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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