STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1875PFAM: short-chain dehydrogenase/reductase SDR; KEGG: asa:ASA_3580 sorbitol-6-phosphate dehydrogenase. (258 aa)    
Predicted Functional Partners:
nuoC
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 
 0.908
Tola_1874
PFAM: Glucitol operon activator; KEGG: asa:ASA_3579 glucitol/sorbitol operon activator.
 
    0.898
Tola_1878
TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system protein II sorbitol-specific factor; KEGG: asa:ASA_3583 PTS system, glucitol/sorbitol-specific IIBC component.
 
    0.813
Tola_0246
PFAM: Glucitol operon activator; KEGG: asa:ASA_3579 glucitol/sorbitol operon activator.
 
    0.753
Tola_1876
PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: asa:ASA_3581 PTS system, glucitol/sorbitol-specific IIA component.
 
    0.751
Tola_1877
KEGG: asa:ASA_3582 PTS system, glucitol/sorbitol-specific IIBC component; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIBC subunit; PFAM: Sorbitol phosphotransferase protein II domain protein.
 
    0.690
Tola_0242
TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system protein II sorbitol-specific factor; KEGG: asa:ASA_3583 PTS system, glucitol/sorbitol-specific IIBC component.
 
    0.650
Tola_1037
PFAM: alpha-L-rhamnosidase; KEGG: kpe:KPK_2466 alpha-L-rhamnosidase family protein.
   
 
 0.600
Tola_2193
TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: aha:AHA_2250 malonyl CoA-acyl carrier protein transacylase.
 
 
 0.591
Tola_1873
Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: asa:ASA_3578 DNA-bindng transcriptional repressor SrlR.
  
    0.571
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.