STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1930Peptidase S15; KEGG: mmw:Mmwyl1_1946 peptidase S15. (368 aa)    
Predicted Functional Partners:
Tola_1929
KEGG: ank:AnaeK_3353 hypothetical protein.
 
    0.935
Tola_1331
PFAM: Carboxymuconolactone decarboxylase; Cupin 2 conserved barrel domain protein; Cupin domain protein; KEGG: sus:Acid_2912 carboxymuconolactone decarboxylase.
 
    0.773
Tola_1504
PFAM: Carboxymuconolactone decarboxylase; KEGG: gur:Gura_4370 cupin 2 domain-containing protein.
    0.757
Tola_1323
KEGG: gur:Gura_4371 hypothetical protein.
 
 
 0.726
Tola_0984
PFAM: branched-chain amino acid transport; KEGG: vpa:VPA1004 putative transmembrane protein.
  
     0.719
Tola_1992
PFAM: Carboxymuconolactone decarboxylase; KEGG: bac:BamMC406_3786 carboxymuconolactone decarboxylase.
    0.676
Tola_1932
PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RSc0625 transcription regulator protein.
 
     0.589
Tola_0026
PFAM: glycosyl transferase group 1; KEGG: hip:CGSHiEE_00235 lipooligosaccharide glycosyl transferase G.
  
 
 0.551
Tola_0027
PFAM: glycosyl transferase group 1; KEGG: mmw:Mmwyl1_3481 glycosyl transferase group 1.
  
 
 0.551
Tola_2862
PFAM: glycosyl transferase group 1; KEGG: pmr:PMI3190 glycosyl transferase.
  
 
 0.551
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.