STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tatATwin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (65 aa)    
Predicted Functional Partners:
Tola_1968
TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: vco:VC0395_A2428 sec-independent translocase.
 
 
 0.989
tatC
Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
 
 0.986
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
  
 0.899
Tola_0143
PFAM: Rhomboid family protein; KEGG: asa:ASA_4287 GlpG protein.
   
 
 0.750
Tola_1963
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component precursor.
       0.658
Tola_1964
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component.
       0.658
Tola_1965
PFAM: Asp/Glu/hydantoin racemase; KEGG: rde:RD1_0861 hydantoin racemase.
       0.658
Tola_1966
KEGG: cak:Caul_3707 urate catabolism protein; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase.
       0.658
Tola_0890
KEGG: asa:ASA_2597 hypothetical protein.
 
     0.584
Tola_1552
PFAM: Rhomboid family protein; KEGG: asa:ASA_1773 hypothetical protein.
  
 
 0.570
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.