STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1973PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cko:CKO_03786 D-allose transporter ATP-binding protein. (509 aa)    
Predicted Functional Partners:
Tola_1972
PFAM: inner-membrane translocator; KEGG: ecc:c5092 D-allose transporter subunit; Belongs to the binding-protein-dependent transport system permease family.
 0.993
Tola_1974
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ecd:ECDH10B_4279 D-allose ABC transporter periplasmic-binding protein.
 
 0.973
Tola_1941
PFAM: inner-membrane translocator; KEGG: msu:MS0199 AraH protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.869
Tola_0573
PFAM: inner-membrane translocator; KEGG: vpa:VPA1085 ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.851
Tola_2156
PFAM: inner-membrane translocator; KEGG: aha:AHA_1905 L-arabinose transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.847
Tola_1834
PFAM: inner-membrane translocator; KEGG: eca:ECA1949 putative sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.843
Tola_0053
PFAM: inner-membrane translocator; KEGG: kpe:KPK_5180 putative ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
   
 0.798
Tola_2637
PFAM: inner-membrane translocator; KEGG: aha:AHA_4098 beta-methylgalactoside transporter inner membrane component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.796
Tola_1970
PFAM: ROK family protein; KEGG: cko:CKO_03789 D-allose kinase.
       0.777
Tola_1971
PFAM: ribulose-phosphate 3-epimerase; KEGG: alsE; D-allulose-6-phosphate 3-epimerase.
  
    0.777
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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