STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_2156PFAM: inner-membrane translocator; KEGG: aha:AHA_1905 L-arabinose transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (332 aa)    
Predicted Functional Partners:
araG
ABC transporter related; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
 0.995
Tola_2158
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: asa:ASA_2396 ABC-type arabinose transporter, periplasmic binding protein.
 
 0.970
Tola_1974
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ecd:ECDH10B_4279 D-allose ABC transporter periplasmic-binding protein.
 
 0.872
Tola_1943
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: msu:MS0201 RbsB protein.
 
 0.870
rbsA-2
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.859
Tola_0052
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ecs:ECs5071 putative carbohydrate binding protein.
 
 0.857
Tola_0574
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_04156 D-ribose transporter subunit RbsB.
 
 0.850
Tola_1973
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cko:CKO_03786 D-allose transporter ATP-binding protein.
 
 0.847
Tola_2638
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aha:AHA_4099 galactose/methyl galaxtoside transporter ATP-binding protein.
 
 0.846
rbsA
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.845
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.