STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_2486PFAM: integrase family protein; KEGG: pla:Plav_3466 integrase family protein; Belongs to the 'phage' integrase family. (643 aa)    
Predicted Functional Partners:
Tola_2485
PFAM: LysR substrate-binding; KEGG: bpt:Bpet1274 LysR family transcriptional regulator.
  
     0.760
Tola_2444
KEGG: ajs:Ajs_1398 hypothetical protein.
 
     0.748
Tola_2455
PFAM: Relaxase; protein of unknown function DUF1528; KEGG: har:HEAR2031 hypothetical protein.
 
   
 0.747
Tola_2395
PFAM: Prophage CP4-57 regulatory; KEGG: eba:ebD61 transcriptional regulator.
 
  
 0.746
Tola_2442
KEGG: pla:Plav_3422 putative secreted protein.
  
     0.745
Tola_2428
KEGG: bxe:Bxe_A1200 hypothetical protein.
  
     0.743
Tola_2447
PFAM: protein of unknown function DUF1525; KEGG: net:Neut_0077 hypothetical protein.
  
     0.743
Tola_2449
KEGG: pla:Plav_3429 hypothetical protein.
  
    0.743
Tola_2451
KEGG: xcb:XC_2024 hypothetical protein.
  
     0.742
Tola_2433
KEGG: har:HEAR2005 hypothetical protein.
 
     0.741
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.