STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_2559PFAM: extracellular solute-binding protein family 1; KEGG: aha:AHA_0650 iron binding protein FbpA. (332 aa)    
Predicted Functional Partners:
Tola_2558
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: asa:ASA_0651 ABC-type iron(III) transporter, permease protein.
 
 
 0.997
Tola_2557
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppr:PBPRA3182 putative iron(III) ABC transporter, ATP-binding protein.
 
 
 0.982
Tola_0669
TIGRFAM: thiamine ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: asa:ASA_3416 ABC-type thiamine transporter, permease protein.
  
  
 0.746
Tola_0614
PFAM: periplasmic binding protein; KEGG: aha:AHA_1704 periplasmic binding protein.
  
  
 0.565
Tola_2316
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aha:AHA_1863 thioredoxin-disulfide reductase.
   
  
 0.523
Tola_2556
Response regulator receiver and unknown domain protein; PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: eta:ETA_19240 response regulator in two-component regulatory system with DcuS.
       0.518
Tola_3037
PFAM: fatty acid hydroxylase; KEGG: psa:PST_1622 sterol desaturase.
      0.517
Tola_0678
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: maq:Maqu_3532 TonB-dependent heme/hemoglobin receptor family protein.
 
  
 0.477
Tola_2560
PFAM: nitrogen regulatory protein P-II; KEGG: asa:ASA_0649 nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
       0.471
Tola_1485
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csa:Csal_1051 ABC transporter related.
  
  
 0.460
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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