STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_2608PFAM: cytochrome b562; KEGG: ypb:YPTS_3725 cytochrome b562. (132 aa)    
Predicted Functional Partners:
Tola_2055
PFAM: lipopolysaccharide biosynthesis protein; KEGG: msu:MS0655 hypothetical protein.
  
     0.760
Tola_1132
KEGG: esa:ESA_01570 hypothetical protein.
  
     0.685
Tola_1461
Chromosome segregation and condensation protein MukF; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity.
  
     0.634
Tola_1462
PFAM: chromosome segregation and condensation protein MukE; KEGG: aha:AHA_2378 condesin subunit E.
  
     0.630
Tola_0462
PFAM: protein of unknown function DUF440; KEGG: aha:AHA_2131 dsDNA-mimic protein; Belongs to the UPF0263 family.
  
     0.588
Tola_1380
PFAM: major facilitator superfamily MFS_1; KEGG: aha:AHA_3109 sugar efflux transporter.
  
     0.569
Tola_1303
PFAM: protein of unknown function DUF6 transmembrane; KEGG: spe:Spro_2538 hypothetical protein.
  
     0.560
Tola_1120
PFAM: YfbU family protein; KEGG: aha:AHA_0893 hypothetical protein.
  
     0.558
Tola_1463
PFAM: chromosome segregation and condensation protein MukB domain protein; KEGG: aha:AHA_2377 cell division protein MukB.
  
     0.550
Tola_0634
PFAM: protein of unknown function DUF1439; KEGG: asa:ASA_1289 lipoprotein.
  
     0.521
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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