STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_2679PFAM: AntA/AntB antirepressor domain protein; KEGG: eta:ETA_24290 putative phage anti-repressor protein. (237 aa)    
Predicted Functional Partners:
Tola_2678
PFAM: protein of unknown function DUF927; P4 alpha zinc-binding domain protein; SMART: P4 alpha zinc-binding domain protein; KEGG: eta:ETA_24220 putative prophage primase.
 
     0.852
Tola_2680
Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: ecw:EcE24377A_0279 prophage CP4-57 regulatory protein.
       0.783
Tola_2681
Hypothetical protein.
       0.513
Tola_2682
PFAM: integrase family protein; KEGG: vha:VIBHAR_00841 integrase; Belongs to the 'phage' integrase family.
 
     0.433
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.