STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_2709TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: saz:Sama_2348 cytochrome bd-I oxidase subunit II. (379 aa)    
Predicted Functional Partners:
Tola_2710
PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: asa:ASA_0737 cytochrome d ubiquinol oxidase, subunit I.
 
 0.999
Tola_2708
TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: aha:AHA_3644 cyd operon protein YbgT.
 
 0.996
Tola_0833
KEGG: aha:AHA_3029 cysteine/glutathione ABC transporter membrane/ATP-binding component; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
  
 0.960
Tola_0832
KEGG: aha:AHA_3030 cysteine/glutathione ABC transporter membrane/ATP-binding component; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.944
Tola_2491
KEGG: aha:AHA_3209 fumarate reductase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
     
 0.611
Tola_2707
TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: asa:ASA_0741 Tol system-associated acyl-CoA thioesterase.
       0.523
Tola_1825
PFAM: beta-lactamase domain protein; Rubredoxin-type Fe(Cys)4 protein; flavodoxin/nitric oxide synthase; KEGG: eba:ebA539 anaerobic nitric oxide reductase flavorubredoxin.
  
  
 0.510
tolQ
Protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
       0.507
Tola_2704
TIGRFAM: protein TolA; PFAM: Tol-Pal system TolA; KEGG: apa:APP7_0306 cell envelope integrity inner membrane protein TolA.
  
    0.506
tolR
Protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
       0.503
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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