STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_2780TIGRFAM: sulfur relay protein TusD/DsrE; PFAM: DsrE family protein; KEGG: asa:ASA_0287 intracellular sulfur oxidation protein DsrE. (130 aa)    
Predicted Functional Partners:
Tola_2779
TIGRFAM: sulfur relay protein TusC/DsrF; PFAM: DsrE family protein; KEGG: pmr:PMI2797 intracellular sulfur oxidation protein; Belongs to the DsrF/TusC family.
 
 0.999
Tola_2778
TIGRFAM: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein; KEGG: aha:AHA_4022 hypothetical protein.
 
 
 0.996
tusA
SirA family protein; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family.
 
 
 0.988
Tola_1217
Sulfur relay protein, TusE/DsrC/DsvC family; Part of a sulfur-relay system.
 
 
 0.985
Tola_2781
TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: asa:ASA_0286 putative translation initiation inhibitor.
       0.794
rpsL
Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.
       0.517
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
       0.514
hflD
PFAM: protein of unknown function DUF489; KEGG: asa:ASA_1390 hypothetical protein.
 
     0.498
Tola_2197
PFAM: protein of unknown function DUF177; KEGG: aha:AHA_2246 hypothetical protein.
  
     0.458
rpsG
Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
     
 0.447
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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