STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_2801PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: yen:YE0006 regulatory ATPase RavA. (546 aa)    
Predicted Functional Partners:
Tola_2802
SMART: von Willebrand factor type A; KEGG: yen:YE0005 hypothetical protein.
 
  
 0.965
Tola_2182
PFAM: protein of unknown function DUF1107; KEGG: aha:AHA_1999 hypothetical protein.
  
     0.685
Tola_0809
PFAM: protein of unknown function DUF1100 hydrolase family protein; KEGG: aha:AHA_3423 fermentation/respiration switch protein; Belongs to the UPF0255 family.
  
     0.631
Tola_2973
PFAM: protein of unknown function DUF1040; KEGG: aha:AHA_4219 hypothetical protein.
  
     0.602
Tola_0056
KEGG: asa:ASA_1294 outer membrane lipoprotein.
  
     0.580
Tola_1132
KEGG: esa:ESA_01570 hypothetical protein.
  
     0.571
Tola_0483
PFAM: porin Gram-negative type; KEGG: aha:AHA_0463 hypothetical protein.
  
     0.522
Tola_0634
PFAM: protein of unknown function DUF1439; KEGG: asa:ASA_1289 lipoprotein.
  
     0.511
Tola_2799
Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
       0.503
Tola_2800
Hypothetical protein.
       0.503
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.