STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_2885PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1967 putative hexuronate transporter. (433 aa)    
Predicted Functional Partners:
Tola_2886
Glucan 1,3-alpha-glucosidase; PFAM: glycoside hydrolase family 31; KEGG: eca:ECA1968 putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family.
 
     0.775
Tola_1176
PFAM: major facilitator superfamily MFS_1; KEGG: stm:STM2290 putative transport protein.
  
    0.703
Tola_2887
PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: vpa:VPA1701 putative transcriptional regulatory protein.
 
   
 0.670
Tola_1041
PFAM: RhaT l-rhamnose-proton symport 2; KEGG: msu:MS2326 rhamnose-proton symporter.
  
    0.656
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family.
 
  
 0.574
Tola_3023
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA0643 DNA-binding transcriptional repressor ExuR.
 
   
 0.511
Tola_2559
PFAM: extracellular solute-binding protein family 1; KEGG: aha:AHA_0650 iron binding protein FbpA.
  
  
 0.447
uxaC
PFAM: Glucuronate isomerase; KEGG: vvu:VV2_1070 glucuronate isomerase.
 
   
 0.438
Tola_1791
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: spe:Spro_0060 xylose isomerase domain-containing protein.
 
    0.436
Tola_3086
PFAM: major facilitator superfamily MFS_1; KEGG: ecg:E2348C_2228 D-arabitol membrane transporter.
 
  
 0.423
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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