STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_2896Beta-glucuronidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: eum:ECUMN_1906 beta-D-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (604 aa)    
Predicted Functional Partners:
uxaC
PFAM: Glucuronate isomerase; KEGG: vvu:VV2_1070 glucuronate isomerase.
 
 
 0.944
uxaC-2
PFAM: Glucuronate isomerase; KEGG: kpe:KPK_0591 glucuronate isomerase.
 
 
 0.944
Tola_2895
TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sew:SeSA_A3314 glucuronide carrier protein.
 
  
 0.869
Tola_1713
PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: mmw:Mmwyl1_2712 alpha-N-arabinofuranosidase.
 
  
 0.843
Tola_2161
PFAM: class II aldolase/adducin family protein; KEGG: asa:ASA_2398 L-ribulose-5-phosphate 4-epimerase.
   
 
 0.807
Tola_3068
PFAM: class II aldolase/adducin family protein; KEGG: ppr:PBPRB0275 L-ribulose-5-phosphate 4-epimerase.
   
 
 0.807
Tola_1037
PFAM: alpha-L-rhamnosidase; KEGG: kpe:KPK_2466 alpha-L-rhamnosidase family protein.
 
 
 0.580
Tola_2897
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mpt:Mpe_A3313 LysR family transcriptional regulator.
       0.521
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.511
Tola_0287
TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: vch:VCA0517 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
   
    0.506
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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