STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_2916PFAM: Pirin domain protein; KEGG: cvi:CV_1920 pirin-like protein; Belongs to the pirin family. (280 aa)    
Predicted Functional Partners:
Tola_2871
PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: ppg:PputGB1_1444 extradiol ring-cleavage dioxygenase class III protein subunit B.
 
  
 0.711
azoR
NAD(P)H dehydrogenase (quinone); Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.
 
  
 0.454
Tola_2915
PFAM: periplasmic solute binding protein; KEGG: ppr:PBPRB0544 hypothetical protein; Belongs to the bacterial solute-binding protein 9 family.
       0.447
Tola_2913
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo0642 putative manganese transport system, ATP-asa protein.
       0.442
Tola_2914
PFAM: ABC-3 protein; KEGG: rru:Rru_A3703 ABC-3 transporter component.
       0.442
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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