STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_2931PFAM: protein of unknown function DUF140; KEGG: aha:AHA_3930 putative ABC transporter, permease protein. (259 aa)    
Predicted Functional Partners:
Tola_2930
PFAM: Mammalian cell entry related domain protein; KEGG: aha:AHA_3931 Mce family protein.
 
 0.999
Tola_2932
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aha:AHA_3929 ABC transporter, ATP-binding protein.
 
 0.998
Tola_1351
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psa:PST_0090 probable ATP-binding component of ABC transporter.
 
 0.980
Tola_2929
PFAM: toluene tolerance family protein; KEGG: asa:ASA_0306 toluene tolerance protein Ttg2D.
 
 
 0.977
Tola_2928
KEGG: aha:AHA_3933 anti-anti-sigma factor family protein.
  
 0.961
Tola_1350
PFAM: Mammalian cell entry related domain protein; KEGG: psa:PST_0089 ABC transporter permease.
  
 0.948
Tola_1352
PFAM: protein of unknown function DUF140; KEGG: pap:PSPA7_1915 ABC transporter permease.
  
  
 
0.920
Tola_1080
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: vsa:VSAL_II0312 hypothetical protein, putative anti-sigma factor antagonist.
   
   0.846
Tola_2937
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: asa:ASA_0314 ABC-type transporter, ATP binding protein.
 
  
  0.741
Tola_2927
PFAM: BolA family protein; KEGG: sgl:SG0210 hypothetical protein; Belongs to the BolA/IbaG family.
       0.717
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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