STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_2950TIGRFAM: type IV pilus modification protein PilV; KEGG: asa:ASA_0689 type IV pilus assembly protein. (190 aa)    
Predicted Functional Partners:
Tola_2949
KEGG: asa:ASA_0690 type IV pilus assembly protein.
 
  
 0.976
Tola_2947
KEGG: asa:ASA_0692 type IV pilin biogenesis protein.
 
  
 0.957
Tola_2951
KEGG: cps:CPS_1217 type IV pilus biogenesis protein PilE.
 
  
 0.950
Tola_2948
KEGG: asa:ASA_0691 hypothetical protein.
       0.773
Tola_2946
KEGG: asa:ASA_0693 putative type IV pilus biogenesis protein.
 
  
 0.720
Tola_2518
KEGG: aha:AHA_0692 type IV pilin.
 
  
 0.668
Tola_2626
PFAM: Pilus assembly protein PilP; KEGG: asa:ASA_1123 type IV pilus biogenesis protein TapP.
  
  
 0.603
Tola_2515
KEGG: aha:AHA_0695 hypothetical protein.
  
  
 0.602
Tola_1570
Hypothetical protein; KEGG: asa:ASA_2532 type IV pilus assembly protein TapV.
  
     0.593
Tola_2516
KEGG: aha:AHA_0694 putative type IV pilin.
  
  
 0.561
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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