STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_2989KEGG: ppu:PP_5388 hypothetical protein. (123 aa)    
Predicted Functional Partners:
Tola_1938
Hypothetical protein; KEGG: eba:ebA2168 cation efflux system transmembrane protein.
     
 
0.900
Tola_2987
TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: psa:PST_3361 heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.863
Tola_2988
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: psa:PST_3362 heavy metal RND efflux membrane fusion protein, CzcB family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.712
Tola_2990
Hypothetical protein.
       0.518
Tola_0686
KEGG: eba:ebA5327 hypothetical protein.
  
     0.492
Tola_1031
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: vco:VC0395_A1020 putative multidrug resistance protein.
 
 
 0.491
Tola_0352
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: aha:AHA_2909 outer membrane protein OprM.
 
 
 0.473
Tola_0292
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: hch:HCH_01213 outer membrane protein.
  
 
 0.406
Tola_1745
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pfo:Pfl01_3644 RND efflux system, outer membrane lipoprotein, NodT.
  
 
 0.406
Tola_2464
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pla:Plav_3444 RND efflux system outer membrane lipoprotein.
  
 
 0.406
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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