STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_3065KEGG: ppr:PBPRB0271 putative L-ascorbate 6-phosphate lactonase. (355 aa)    
Predicted Functional Partners:
Tola_3066
PFAM: putative sugar-specific permease SgaT/UlaA; phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: ppr:PBPRB0273 ascorbate-specific PTS system enzyme IIC/IIB.
 
 
 0.984
Tola_3067
Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ppr:PBPRB0274 phosphotransferase system mannitol/fructose-specific IIA component.
 
  
 0.979
Tola_3069
PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: ppr:PBPRB0276 3-keto-L-gulonate-6-phosphate decarboxylase.
 
  
 0.979
Tola_3063
Hexulose-6-phosphate isomerase; KEGG: ppr:PBPRB0269 putative L-xylulose 5-phosphate 3-epimerase; TIGRFAM: hexulose-6-phosphate isomerase; PFAM: Xylose isomerase domain protein TIM barrel.
 
   
 0.894
Tola_3068
PFAM: class II aldolase/adducin family protein; KEGG: ppr:PBPRB0275 L-ribulose-5-phosphate 4-epimerase.
 
   
 0.619
Tola_3064
TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: ppr:PBPRB0270 hypothetical protein.
 
     0.579
Tola_2161
PFAM: class II aldolase/adducin family protein; KEGG: asa:ASA_2398 L-ribulose-5-phosphate 4-epimerase.
 
   
 0.567
Tola_3062
Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: ppr:PBPRB0268 transcriptional repressor UlaR.
 
    0.536
Tola_2554
TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; HI0933 family protein; NADH:flavin oxidoreductase/NADH oxidase; KEGG: kpe:KPK_2907 oxidoreductase, FAD/FMN-binding/flavocytochrome c.
 
    0.433
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.