STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_3072KEGG: son:SO_4578 transposase, putative. (339 aa)    
Predicted Functional Partners:
Tola_0645
KEGG: sbn:Sbal195_0449 hypothetical protein.
  
     0.581
Tola_0305
SMART: AAA ATPase; KEGG: ssn:SSON_3893 ATP-binding protein.
  
 
 0.503
Tola_0701
PFAM: GCN5-related N-acetyltransferase; KEGG: ppr:PBPRB0879 putative acetyltransferase.
  
     0.498
Tola_0762
KEGG: aha:AHA_2596 hypothetical protein.
  
     0.458
Tola_1149
KEGG: asa:ASA_0611 hypothetical protein.
  
     0.444
Tola_1362
TIGRFAM: CRISPR-associated protein, Csy3 family; KEGG: plu:plu1795 hypothetical protein.
   
   0.432
Tola_3073
Hypothetical protein.
       0.422
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.