STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acoBPutative pyruvate dehydrogenase E1 component, beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (327 aa)    
Predicted Functional Partners:
prsA
Ribose-phosphate pyrophosphokinase; Predicted based on similarity to protein in genome with GenBank Accession Number CP000770.
   
 0.999
acoA
Pyruvate dehydrogenase E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 0.999
aceF
Dihydrolipoamide acyltransferase E2 component; Predicted based on similarity to protein in genome with GenBank Accession Number CP000770.
 
 0.981
sucA
2-oxoglutarate dehydrogenase, E1 component; Predicted based on similarity to protein in genome with GenBank Accession Number CP000770.
   
 0.974
sucB
2-oxoglutarate dehydrogenase, E2 component; Predicted based on similarity to protein in genome with GenBank Accession Number CP000770.
  
 0.971
lpdA
Dihydrolipoamide dehydrogenase; Predicted based on similarity to protein in genome with GenBank Accession Number CP000770.
  
 0.962
lpdA-2
Dihydrolipoamide dehydrogenase; Predicted based on similarity to protein in genome with GenBank Accession Number CP000770.
  
 0.962
fbaA
Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
  
 
 0.925
pta
Phosphate acetyltransferase; Predicted based on similarity to TIGRFAM pta and related proteins in nr.
  
 
 0.878
ACU52855.1
Ferredoxin-like protein; Predicted based on similarity to related proteins in nr.
   
 0.754
Your Current Organism:
Sulcia muelleri SMDSEM
NCBI taxonomy Id: 595499
Other names: C. Sulcia muelleri SMDSEM, Candidatus Sulcia muelleri SMDSEM, Candidiatus Sulcia muelleri str. SMDSEM, Candidiatus Sulcia muelleri strain SMDSEM
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