STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_009288Uncharacterized protein. (89 aa)    
Predicted Functional Partners:
CAOG_002219
Uncharacterized protein.
   
 0.846
CAOG_002291
Ubiquitin-conjugating enzyme E2N; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.834
CAOG_005121
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.831
CAOG_006796
Ubiquitin-conjugating enzyme.
    
 0.823
CAOG_002972
Fanconi anemia.
    
 0.803
CAOG_000656
BAF53b; Belongs to the actin family.
   
 0.784
CAOG_007093
RuvB-like helicase; Belongs to the RuvB family.
    
 0.781
CAOG_007306
Uncharacterized protein; Belongs to the actin family.
    
 0.769
CAOG_001097
Uncharacterized protein.
    
 0.754
CAOG_004682
DNA repair protein RAD54.
  
 0.754
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
Server load: low (22%) [HD]