STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_001101Methylmalonyl Coenzyme A mutase. (698 aa)    
Predicted Functional Partners:
CAOG_002301
Mmaa protein.
  
 
 0.942
CAOG_006870
Methylmalonyl CoA epimerase.
  
  
 0.882
CAOG_003543
Succinate-CoA ligase subunit beta.
   
 0.878
CAOG_001325
Succinate-CoA ligase subunit beta.
   
 0.816
CAOG_004909
ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family.
   
 0.780
CAOG_004042
Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
   
 
 0.776
CAOG_002401
Malate dehydrogenase.
     
 0.744
CAOG_001866
Phosphoenolpyruvate carboxykinase.
     
 0.743
CAOG_002027
Citrate synthase; Belongs to the citrate synthase family.
    
  0.572
CAOG_004139
Citrate synthase; Belongs to the citrate synthase family.
    
  0.572
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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