STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_001717ANK_REP_REGION domain-containing protein. (935 aa)    
Predicted Functional Partners:
CAOG_006287
Glycerophosphodiesterase GDE1.
  
 
0.804
CAOG_005790
Uncharacterized protein.
    
0.755
CAOG_000840
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.668
CAOG_001442
Serine/threonine-protein phosphatase.
    
  0.637
CAOG_005000
Roc domain-containing protein.
    
 0.634
CAOG_006179
Skp1; Belongs to the SKP1 family.
    
  0.634
CAOG_003509
Ubiquitin/ribosomal protein S27a fusion protein.
    
  0.633
CAOG_008398
Uncharacterized protein.
    
  0.621
CAOG_005365
ANK_REP_REGION domain-containing protein.
  
 
  0.619
CAOG_005287
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
  0.616
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.